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You are here: Home / 8.9.2. A Feasible Reactor

8.9.2. A Feasible Reactor

8.9.2. A Feasible Reactor for doing Anoxic Aquarium Filtration
8.9.2. A Feasible Reactor for doing Anoxic Aquarium Filtration

Table of Contents

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    • Note
    • Commercial Denitrifying Reactor Design
    • Reactor Design for Aquariums
    • Alternative Design Using a Canister Filter
  • 8.9.3. Assimilatory Denitrification
    • More Information
  • 14.2.4. Anaerobic Substrates (Deep sand beds)
  • 7.5. Denitrifying Filter Media (BioHome and De*Nitrate)
  • 8.9. Commercial Anaerobic Reactors
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Note

Note that we have never set up a denitrifying reactor for our aquariums and will never set up such a reactor. We decidedly do NOT recommend that one build such a reactor to reduce water changes. It’s much easier to either do water changes or add plants to a set up. And denitrifying reactors can kill fish if improperly set up. But there are many in the hobby that love DIY projects like this just out of scientific curiosity. If you’re of that bent, go for it.

On a further note, we received one comment from an an engineer who designs denitrifying sewage treatment plants and who has a bunch of aquariums. He ONLY does water changes to control his nitrate levels. He said he would never consider using a denitrifying reactor on his aquariums. Even this expert wouldn’t tackle building a reactor like this.

Vieja heterospilus
Vieja heterospilus
Commercial Denitrifying Reactor Design

There are some denitrifying reactor designs which are used on a large scale in several locations in Europe to reduce nitrates in sewage effluent to less than 3 ppm. These designs are illustrated by the following schematics (from the “Design and Operation of Moving Bed Biofilm Reactor Plants for Very Low Effluent Nitrogen and Phosphorus Concentrations”, Rusten, 2007):

European anaerobic reactor design
European anaerobic reactor design

The aerobic sections (denoted by AE) have air being pumped into them (the dotted line on the bottom). The anoxic sections are denoted by the letters AN. These sections are sealed and tightly closed off to the air. Note how each AN section has a bladed pump to move the solution and the media round the reactor, along with a “carbon” addition (i.e. a carbohydrate addition).

What is interesting here is that these reactors do not add the carbon addition in one section to remove the oxygen and then move it into a separate section to remove the nitrate as nitrogen gas. As the oxygen rich water enters the chamber it is rapidly diluted and rapidly depleted of what oxygen it has. So a separate section is not needed. However these reactors do require a separate oxygen rich section to make the ammonia into nitrate before it goes to the anoxic section.

Tyrannochromis nigriventer
Tyrannochromis nigriventer
Reactor Design for Aquariums

This proven European design is easily modified for the aquarium. This is one such design.

feasible aquarium anaerobic reactor
feasible aquarium anaerobic reactor

The small flows here need to be meticulously crafted to give nitrate reduction:

  • too much vodka and there will be a bacterial bloom in the aquarium water
  • too little vodka and you will be pouring nitrite into the aquarium
  • too much water from the aquarium and the bacteria won’t have time to work (denitrifying bacteria work very slowly)
  • too little flow of water from the aquarium and the nitrate won’t be dropped as much as possible.

The amount of vodka added will govern the redox or ORP (measured via electrode) which in turn will determine if denitrification occurs. Target values for nitrate reduction without formation of nitrite should be -50mv to -250mv ORP.

There are some experimental aquarium denitrification designs which are very similar to this design. One such design can be found in the paper: “Removal of nitrate in aquaria by means of electrochemically generated hydrogen gas as electron donor for biological denitrification”, Grommen et al, 2005.

Tropheus Golden Kazumba
Tropheus Golden Kazumba
Alternative Design Using a Canister Filter

Note that this design can be altered to give a less efficient but easier to make design.

feasible aquarium anaerobic reactor
feasible aquarium anaerobic reactor

Obviously the canister in this design can be replaced with a pump and something like a long pipe filled with media. Any tightly sealed container with media in it and a pump will do the job. The more surface area in the filter (i.e. both a large volume AND a good media like foam, K1 or pot scrubbers) and the more powerful the pump the better it will work.

It is important to emphasis that any anoxic denitrifying reactor must be tightly sealed to prevent ANY contact with air. It cannot be an open sump.

Trichromis salvini Salvin’s Cichlid
Trichromis salvini Salvin’s Cichlid

Note there is another type of reactor which can reduce nitrates. This is a reactor which works through assimilatory denitrification. The uptake by fungi, water molds and bacteria of nitrate is called “assimilatory denitrification”. It is common and well documented. This type of denitrification can be used successfully to keep nitrates low in the aquarium. But using this type of denitrification is challenging. For more on this go to this link:

8.9.3. Assimilatory Denitrification

Melanotaenia boesemani, Boesemani rainbowfish
Melanotaenia boesemani, Boesemani rainbowfish
More Information

For information on the science of anoxic denitrification click on the following links:

14.2.4. Anaerobic Substrates (Deep sand beds)

7.5. Denitrifying Filter Media (BioHome and De*Nitrate)

8.9. Commercial Anaerobic Reactors

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  • 1. Aquarium Basics
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  • 10.16. Graphite Disease in Bettas
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  • 10.5. Hexamita
  • 10.6. Flukes
  • 10.7. Fish Saprolegnia
  • 10.8. Lymphocystis
  • 10.9. Anchor Worms
  • 11. Fish Disease Symptoms
  • 11.1. Hole in the Head
  • 11.1.1. Hexamita and HITH
  • 11.1.2. Spots on Head
  • 11.10. White Skin Blotches
  • 11.11. Red Skin Blotches
  • 11.12. Neon Disease
  • 11.13. Slime Coat
  • 11.14. Scaly Skin
  • 11.15. Fish not Eating
  • 11.16. Aggression
  • 11.17. Black Death
  • 11.18. Black Head Syndrome
  • 11.19. Gas Bubble Disease
  • 11.2. White Poop
  • 11.3. Malawi Bloat
  • 11.4. Dropsy
  • 11.5. Hollow Belly
  • 11.6. Swim Bladder
  • 11.7. Shimmying
  • 11.8. Twirling
  • 11.9. Spinal Deformities
  • 12. Treatment
  • 12.1. Basics of Treatment
  • 12.10. The Shotgun Approach
  • 12.2. Treatments Summary
  • 12.3. Quarantine Tanks
  • 12.4. Ineffective Medicines
  • 12.4.1. “Natural” Aquarium Medications
  • 12.4.2. Salt
  • 12.4.3. Aquarium Dyes
  • 12.4.4. Formalin
  • 12.4.5. Antiseptics
  • 12.4.6. Furan and Sulfa
  • 12.4.7. Quinine
  • 12.5. Fish Don’t Drink
  • 12.6. Sterilization
  • 12.7. Making Medicated Food
  • 12.8. Euthanizing a Fish
  • 12.9. Avoiding Disease
  • 13. Stocking
  • 13.1. Stocking Opinions
  • 13.2. Calculating Stocking Ratio
  • 13.3. Lifespan of a Fish
  • 14. Equipment
  • 14.1. UV Sterilizers
  • 14.1.1. UV in Depth
  • 14.1.2 Selecting a UV Unit
  • 14.10.Wood
  • 14.11. Fish Electrocution
  • 14.12. Silicone
  • 14.13. Aquarium Electric Cost
  • 14.14. Cleaning Old Aquariums
  • 14.15. Aquarium Aesthetics
  • 14.2. Substrates
  • 14.2.1. Sand
  • 14.2.2. Gravel
  • 14.2.3. Buffering Substrates
  • 14.2.4. Anaerobic Myth
  • 14.2.4.1. Anaerobic Science
  • 14.3. Rocks
  • 14.4. Lights
  • 14.4.1. Light Spectrums
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  • 14.5. Piping
  • 14.6. Pumps
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  • 15. Planted Aquarium
  • 15.1. Planted Aquariums in Depth
  • 15.10. Hybrid Planted Aquariums
  • 15.11. Many Fish Many Plants
  • 15.12. Propagating Plants
  • 15.13. Hau Planted Aquariums
  • 15.14. Low Tech Planted Aquariums
  • 15.15. Sterilizing Plants
  • 15.16. Natural Aquarium
  • 15.17. Father Fish Aquariums
  • 15.2. Fish
  • 15.3. Fish Limitations
  • 15.4. Types of Planted Tanks
  • 15.4.1. Planted Aquarium Examples
  • 15.5. Aquarium Fertilizing
  • 15.5.1. Ready Made Fertilizers
  • 15.5.2. Fertilizer Programs
  • 15.5.3. Estimative Index
  • 15.5.4. NH4 and Tabs Fertilizer
  • 15.5.5. DIY Epiphytic Fertilizer
  • 15.5.6. Fish Food Fertilizer
  • 15.5.7. DIY Fertilizers
  • 15.6. Carbon Dioxide
  • 15.6.1. Low Tech CO2
  • 15.6.2. KH pH CO2 Relationships
  • 15.6.3. High Tech CO2 Systems  
  • 15.6.4. CO2 From Food
  • 15.6.5. Liquid CO2
  • 15.6.6. Measuring CO2
  • 15.7. Plant Substrates
  • 15.8. Walstad Aquarium
  • 15.9. High Tech Planted Aquariums
  • 16. Aquarium Algae
  • 16.1. Algae Biology
  • 16.10. Water Mold
  • 16.10.1. White Fuzz
  • 16.11. Slime Mold
  • 16.12. Red Spot Algae
  • 16.13. A Few Oddities
  • 16.2. Controlling Algae
  • 16.2.1. Algae in Fish Only Tanks
  • 16.2.2. Algae in High Tech Tanks
  • 16.2.3. Algae in Low Tech Tanks
  • 16.2.4. Algae Eaters
  • 16.2.5. The Algae War
  • 16.2.6. Chemical Algae Control
  • 16.2.7. Chihiros Doctor
  • 16.3. Thread Algae
  • 16.4. Blue-Green Algae
  • 16.5. Black Beard Algae
  • 16.6. Staghorn Algae
  • 16.7. Aquarium Green Water
  • 16.8. Brown Algae
  • 16.9. Green Spot Algae
  • 17. Aquarium Fish Selection
  • 17.1. Native Water Chemistries
  • 17.10. Aquarium Shrimp
  • 17.11. Discus
  • 17.11.1. Discus Husbandry
  • 17.11.2. Filtration for Discus
  • 17.11.3. Water for Discus
  • 17.11.4. Food for Discus
  • 17.11.5. Discus Pheromones
  • 17.11.6. Breeding Discus
  • 17.11.7. Discus Photos
  • 17.12. Axolotl
  • 17.2. Biotopes
  • 17.2.1. Blackwater Biotope
  • 17.3. Blackwater Fish
  • 17.4. Lake Malawi Cichlids
  • 17.4.1. Malawi Aquariums
  • 17.5. Goldfish
  • 17.5.1. Types of Goldfish
  • 17.5.2. Size of Goldfish
  • 17.5.3. Stocking Goldfish
  • 17.5.4. Goldfish Care
  • 17.6. Guppies and Livebearers
  • 17.7. Aquarium Bettas
  • 17.8 Oscars
  • 17.9. Nano Aquarium
  • 18. Aquarium Maintenance
  • 18.1. Aquarium Water Changes
  • 18.1.1. Water Changes in Depth
  • 18.1.2. Aquarium Water Change Math
  • 18.1.3. Water Change Water
  • 18.1.4. Softened, RO, DI, TDS
  • 18.2. Drip Water Changes
  • 18.3. Cleaning the Substrate
  • 18.4. Cleaning a Filter
  • 18.5. Heavy Stocked Maintenance
  • 18.6. Old Tank Syndrome
  • 18.7. Sick Tank Syndrome
  • 2. Aquarium Cycling
  • 2.1. Fish-less Cycling
  • 2.10. Nitrogen Cycle
  • 2.11. Inoculate for Cycling
  • 2.12. Beneficial Bacteria
  • 2.13. Cycling Test
  • 2.14. The Mature Aquarium
  • 2.15. Cycling a Planted Aquarium
  • 2.2. Many Ways to Cycle
  • 2.3. How I Cycle
  • 2.4. Cycling with Ammonia
  • 2.4.1. Dr. Tim’s Cycling Method
  • 2.5. Aquarium Fish-in Cycling
  • 2.5.1. Fish-in Cycling Science
  • 2.5.2. Rapid Fish-in Cycling
  • 2.6. Not Cycling at All
  • 2.7. New Tank Syndrome
  • 2.8. Bacteria-in-a-bottle
  • 2.8.1. Bacteria in a Bottle in Depth
  • 2.8.2. Sludge Removing Bacteria
  • 2.9. Instant Cycling Chemicals
  • 3. Fish Food
  • 3.1. Insignificance of Food
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  • 3.6.1. Dry Fish Food in Depth
  • 3.7. Banned Fish Food
  • 3.8. Food and Malawi Bloat
  • 3.9. Fish Food and Gunk
  • 4. Temperature, pH, KH and GH
  • 4.1. Importance of Water
  • 4.10. ORP or Redox
  • 4.11. Tank Syndromes
  • 4.2. Aquarium Temperatures
  • 4.3. Free Floating Bacteria
  • 4.4. Aquarium pH
  • 4.4.1. Aquarium pH is Not Important
  • 4.4.2. Buffering the Water
  • 4.4.3. Carbon Dioxide and pH
  • 4.4.4. Dropping pH
  • 4.4.5. Raising pH
  • 4.5. Water Hardness
  • 4.5.1. General Hardness
  • 4.5.2. Carbonate Hardness
  • 4.5.2.1. KH and Cycling
  • 4.6. Salts in the Water
  • 4.6.1. Trace Additives
  • 4.7. Fish Tolerance to pH
  • 4.8. “Stability” isn’t Important
  • 4.8.1. Rapid Thermal and pH Shifts
  • 4.9. Un-bagging Fish
  • 5. Ammonia, Nitrite, Nitrate and Chlorine
  • 5.2. Safe Ammonia Levels
  • 5.2.1. Ammonia in Depth
  • 5.2.3. High Ammonia
  • 5.3. Safe Nitrite Levels
  • 5.3.2. Nitrite in More Depth
  • 5.4. Safe Nitrate Levels
  • 5.4.1. Nitrate in Depth
  • 5.5. Chlorine and Chloramine
  • 5.5.1. Chlorination in Depth
  • 5.5.2. Chloramines
  • 5.5.2.1. Ammonia in Chloramine
  • 5.5.3. Water Conditioners
  • 5.5.3.1. Ammonia Detoxifying
  • 5.5.3.2. Prime and Safe
  • 5.5.3.2.1. Prime, Safe and Ammonia
  • 5.5.3.2.2. Prime, Safe and Cycling
  • 5.5.3.2.3. Prime, Safe and Sodium Dithionite
  • 5.5.3.2.4. Prime, Safe and Chloramine
  • 5.5.3.2.5. Prime Concentration
  • 5.5.3.2.6. Safe Cannot be Made into Prime
  • 5.5.3.3. Conditioner Chemistry
  • 5.5.3.4. Cost of Conditioners
  • 5.5.3.5. Conditioner Testing
  • 5.5.3.6. Review of Conditioners
  • 5.5.4. Stress Coat Products
  • 6. Filtration
  • 6.1. Mechanical Filtration
  • 6.1.1. Cleaned Mechanical Filtration
  • 6.1.2. Uncleaned Mechanical Filtration
  • 6.2. Biofiltration
  • 6.2.1. Detritus Explained
  • 6.2.2. Brown Gunk
  • 6.2.3. Cloudy Water
  • 6.3. Over-filtration
  • 6.4. Crystal-Clear Water
  • 6.4.1. Crystal-Clear Water in Depth
  • 6.4.2. Polishing Filtration
  • 6.5. Water Flow Rate
  • 6.5.1. Flow Function
  • 6.5.2. Substrate as a Filter
  • 6.6. Aquaponic Filtration
  • 6.7. Nitrate Factory
  • 6.8. Thorough Cleaning
  • 6.8.1. Filter Cleaning Tests
  • 6.9. Tap Water Rinsing
  • 7. Filter Media
  • 7.1. Review of Media
  • 7.1.1. Cost of Filter Media
  • 7.1.2. Media Function
  • 7.1.3. Filter Media Test
  • 7.1.3.1. Ammonia Oxidizing Test
  • 7.1.3.2. Water Clarity Test
  • 7.2. Individual Media List
  • 7.2.1. Polyester Floss
  • 7.2.10. Growstone
  • 7.2.11. Ceramics
  • 7.2.12. Matrix
  • 7.2.13. Clay Balls
  • 7.2.14. BioHome Filter Media
  • 7.2.2. Foam Media
  • 7.2.3. K1 Media
  • 7.2.4. Pumice Perlite
  • 7.2.5. Gravel
  • 7.2.6. PP EVA Pads
  • 7.2.7. Bio Balls
  • 7.2.8. Pot Scrubbers
  • 7.2.9. Lava Rock
  • 7.3. Media Volume
  • 7.4. Chemical Filtration Media
  • 7.4.2. Activated Carbon
  • 7.4.3. Ion-Exchange Resins
  • 7.4.4. Zeolite
  • 7.4.5. Phosphate Remover
  • 7.4.6. Purigen
  • 7.4.7. Poly-Filter
  • 7.4.8. Chemi-pure
  • 7.5. Denitrifying Media
  • 7.6. Media Surface Area
  • 8. Review of Aquarium Filters
  • 8.1. Review of Filters
  • 8.1.1. Filter Test
  • 8.2. Hang-on-the-back Filters
  • 8.3. Canister Filter
  • 8.3.1. Canisters in Depth
  • 8.3.2. Do-it-yourself Canisters
  • 8.3.3. FX Series Canister Filters
  • 8.4. Sponge Filters
  • 8.5. Under Gravel Filters
  • 8.5.1. Under-Gravels in Depth
  • 8.5.2. DIY Undergravel Filter
  • 8.6. Sump Filters
  • 8.6.1. Sumps in Depth
  • 8.6.2. Static Sump Filters
  • 8.6.3. Trickle Filters
  • 8.6.4. Wet-Dry Filters
  • 8.6.5. Fluidized Beds
  • 8.6.6. Do-it-yourself Sumps
  • 8.6.7. Foam Sump
  • 8.7. Other Filters
  • 8.7.1. Sand Filters
  • 8.7.2. High Performance Filters
  • 8.7.3. Hamburg Matten Filter
  • 8.7.4. Diatomaceous Earth Filters
  • 8.7.5. DIY Bottle Filters
  • 8.7.6. Small Filters
  • 8.7.7. Bottom of the Tank Matten
  • 8.7.8. Small DIY Filters
  • 8.8. Filter and Media Design
  • 8.8.1. Sizing Filters in Depth
  • 8.9. Anaerobic Reactors
  • 8.9.1. Biocenosis Reactor
  • 8.9.2. A Feasible Reactor
  • 8.9.3. Assimilatory Denitrification
  • 9. Aeration
  • 9.1. Aeration in Depth
  • 9.2. Turbulence and Aeration
  • 9.3. Air Stones
  • 9.3.2. Cleaning Air Stones
  • 9.4. Skimmers and Spray Bars
  • 9.5. Aeration and Temperature
  • 97. Author
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  • 1. Aquarium Basics
  • 2. Aquarium Cycling
  • 3. Fish Food
  • 4. Temperature, pH, KH and GH
  • 5. Ammonia, Nitrite, Nitrate and Chlorine
  • 6. Filtration
  • 7. Filter Media
  • 8. Aquarium Filters
  • 9. Aeration
  • 10. Diseases
  • 11. Fish Disease Symptoms
  • 12. Treatment
  • 13. Stocking
  • 14. Equipment
  • 15. Planted Aquarium
  • 16. Aquarium Algae
  • 17. Aquarium Fish Selection
  • 18. Aquarium Maintenance
  • 97. Author